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publications

Synthesis and Simulation of Ensembles of Boolean Networks for Cell Fate Decision

Published in CMSB, 2020

Recommended citation: Chevalier, S., Noël, V., Calzone, L., Zinovyev, A., Paulevé, L. (2020). Synthesis and Simulation of Ensembles of Boolean Networks for Cell Fate Decision. In: Abate, A., Petrov, T., Wolf, V. (eds) Computational Methods in Systems Biology. CMSB 2020. Lecture Notes in Computer Science(), vol 12314. Springer, Cham. doi.org/10.1007/978-3-030-60327-4_11. https://link.springer.com/chapter/10.1007/978-3-030-60327-4_11

BoNesis: a Python-based declarative environment for the verification, reprogramming, and synthesis of Most Permissive Boolean networks

Published in CMSB, 2024

Recommended citation: S. Chevalier, D. Boyenval, G. Magaña-López, T. Roncalli, A. Vaginay, L. Paulevé. BoNesis: a Python-based declarative environment for the verification, reprogramming, and synthesis of Most Permissive Boolean networks. CMSB 2024: 22nd International Conference on Computational Methods in Systems Biology, 2024, Pisa, Italy. https://hal.science/hal-04629083

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